Artoni Kevin R Ang   Yasufumi Umena   Ayana Sato-Tomita   Naoya Shibayama   Naohisa Happo   Riho Marumi   Yuta Yamamoto   Koji Kimura   Naomi Kawamura   Yu Takano   Tomohiro Matsushita   Yuji C Sasaki   Jian Ren Shen   Kouichi Hayashi   
Journal of synchrotron radiation 30(Pt 2) 368-378 2023年3月
X-ray fluorescence holography (XFH) is a powerful atomic resolution technique capable of directly imaging the local atomic structure around atoms of a target element within a material. Although it is theoretically possible to use XFH to study the ...
Nagatomo, S   Shoji, M   Terada, T   Nakatani, K   Shigeta, Y   Hirota, S   Yanagisawa, S   Kubo, M   Kitagawa, T   Nagai, M   Ohki, M   Park, S.-Y   Shibayama, N   
We report expression and purification of a FLT3 protein with ITD mutation (FLT3-ITD) with a steady tyrosine kinase activity using a silkworm-baculovirus system, and its application as a fast screening system of tyrosine kinase inhibitors. The FLT3...
The Journal of Physical Chemistry Letters 12(xxxx) 2172-2176 2021年2月 [査読有り]
Hydration water plays a crucial role for activating the protein dynamics required for functional expression. Yet, the details are not understood about how hydration water couples with protein dynamics. A temperature hysteresis of the ice formation...
Proceedings of the National Academy of Sciences 117(9) 4741-4748 2020年3月 [査読有り]
Hemoglobin is one of the best-characterized proteins with respect to structure and function, but the internal ligand diffusion pathways remain obscure and controversial. Here we captured the CO migration processes in the tense (T), relaxed (R), an...
Artoni Kevin R. Ang   Ayana Sato-Tomita   Naoya Shibayama   Yasufumi Umena   Naohisa Happo   Riho Marumi   Koji Kimura   Tomohiro Matsushita   Kazuto Akagi   Takahiko Sasaki   Yuji C. Sasaki   Kouichi Hayashi   
Japanese Journal of Applied Physics 59(1) 2020年1月
X-ray fluorescence holography (XFH) is a technique that can directly image the 3D arrangement of atoms around an element in a sample. The holograms contain both intensity and phase information, allowing atomic reconstruction without needing prior ...
SY Park   N Shibayama   T Hiraki   JRH Tame   
BIOCHEMISTRY 43(27) 8711-8717 2004年7月
A number of ligand binding studies of human adult hemoglobin (HbA) cross-linked between Lys 82beta(1) and Lys 82beta(2) with bis(3,5-dibromosalicyl)fumarate have been reported. The oxygen binding properties of native HbA, including the cooperativi...
Theory and simulations predict that the folding kinetics of protein-like heteropolymers become nonexponential and glassy (i.e., controlled by escape from different low-energy misfolded states) at low temperatures, but there was little experimental...
S Adachi   SY Park   JRH Tame   Y Shiro   N Shibayama   
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 100(12) 7039-7044 2003年6月
Human Hb, an alpha(2)beta(2) tetrameric oxygen transport protein that switches from a T (tense) to an R (relaxed) quaternary structure during oxygenation, has long served as a model for studying protein allostery, in general. Time-resolved spectro...